Ontologics®::Ontologics.info - Ontologies and Knowledge Bases, and XML, HTML and XHTML

Ontologies and Knowledge Bases, and XML, HTML and XHTML

This webpage lists some examples of the possibilities that are given with ontologies and domain specific knowledge bases by applying markup languages, like the XML, HTML and XHTML. The links to the ontologies and the XML formats do not reflect in any aspect our choice, the evaluation of their significance, or/and the proof of their full correctness.
Persons and enterprises who are interested in our approach can ask for high-professional customer services and also take a look at our Hightech Operating System™ (HOS) OntoLinux™.

This webpage is curated and was actualized the last time on the 23rd of August 2011.
A link with a red dot is a broken, outdated or not recommended link.

Ontology and KB Science Documentation	XML Science Documentation Transforming Scientific Data into XML (StarDOM)
Astronomy Astronomy Ontology in OML	Astronomy
Observing Astronomy Ontology of Astronomical Object Types (International Virtual Observatory Alliance (IVOA))	Observing Astronomy Astronomical Dataset Markup Language (ADML) (NASA Goddard Astronomical Data Center (ADC)) Astronomical Markup Language (AML) Flexible Image Transport System Markup Language (FITSML) (NASA Goddard Space Flight Center FITS Support Office)
Instrumental Astronomy	Instrumental Astronomy Astronomical Instrument Markup Language (AIML) in IML
Biology Berkeley Bioinformatics Open-source Projects Open Biological and Biomedical Ontolo- gies (OBO) Ontologies for Ethology (animal behavior), Loggerhead sea turtle (Caretta caretta) nesting behavior Barley Cereal Plant Protection Ontology	Biology Systems Biology Markup Language (SBML)
Biology: Documentation GENIA - Mining literature for knowledge in molecular biology	Biology: Documentation
Chemistry	Chemistry Chemical Markup Language (CML), original site Chemical Markup Language (CML) Chemical Industry Data Exchange (CIDX®), ceased to exist Chem eStandard for the Chemical Industry Molecular Dynamics Markup Language (MoDL)
Biochemistry / Biotechnology Molecular for Biology Ontology (MBO) Gene Ontology (GO) EcoCyc: Encyclopedia of Escherichia coli K-12 Genes and Metabolism EcoCyc Gene Ontology in OML Biological reaction events, Biomolecular reactions MicroArray and Gene Expression (MAGE) Ontology PharmGKB® - Pharmacogenomics Knowledge Base	Biochemistry / Biotechnology National Center for Biotechnology Informat- ion (NCBI) Document Type Definition (DTD) specifications generated automatically from the Abstract Syntax Notation number One (ASN.1) specifications for NCBI data in XML Gene Expression Markup Language (GEML) GEML Pattern GEML Profile GeneX Gene Expression Markup Language (GeneXML) GeneXML Array Layout Spot GeneXML Measurement GeneXML Sequence Feature Genome Annotation Markup Elements (GAME) MicroArray and Gene Expression Markup Language (MAGE-ML) Bioinformatic Sequence Markup Language (BSML) Multiple Sequence Alignments Markup Language (MSAML) PROtein eXtensIble Markup Language (PROXIML) BIOpolymer Markup Language (BIOML) CellML
Instrumental (Bio)Chemistry/Analysis	Instrumental (Bio)Chemistry/Analysis Generalized Analytical Markup Language (GAML) Proteomics Standards Initiative (PSI) Mass Spectrometry (MS) data Markup Language (mzML) Mass Spectrometry (MS) data eXtensible Markup Language (mzML) peptide sequence assignments of MS/MS scans (pepXML)
Linguistics and Common-Sense Microkosmos ontology for knowledge-based machine translation Electronic Metastructure for Endangered Languages Data (E-MELD) General Ontology for Linguistic De- scription (GOLD) in OWL Penman Upper Model, general organization of knowledge for natural language processing, now integrated into the Cyc ontology Generalized Upper Model (GUM), domain in- dependent linguistically motivated ontology, multilingual descendent of the Penman Upper Model Wilkins' Ontology OpenCyc ontology, based on the Cyc ontolo- gy Dublin Core® (DC) Metadata Element Set DC metadata in RDF Wordnet® 3.0 in RDF lexical database ThoughtTreasure knowledge base, similar but different to the WordNet® lexical database and the Cyc ontology BRICO Ontology, combination of the top-level of the Cyc ontology and the WordNet® lex- ical database	Linguistics and Common-Sense Dublin Core® (DC) metadata in X/HTML Artificial Intelligence Markup Language (AIML) 1.0.1
Logics, Metadata, and Ontology O#™ Zero Ontology™ John Sowa's Upper Ontology in SUO-KIF Standard Upper Ontology Working Group (SUO WG) Suggested Upper Merged Ontology (SUMO) in SUO-KIF Standard Upper Ontology (SUO) Information Flow Framework Language (IFF) (SUO IFF), vastly simplified and modified version of KIF and sequel to the markup language pair OML /CKML	Logics, Metadata, and Ontology XML Topic Maps (XTM) 1.0 Resouce Description Framework (RDF) eXchangable Faceted Metadata Language (XFML) Meta Content Framework Using XML (MCF) Thesauri, Glossaries, Ontologies, etc. Markup Lanuage (Thema) Vocabulary Markup Language (VocML) Knowledge Representation Specification Language (KRSL) DARPA Agent Markup Language (DAML) Knowledge Interchange Format (KIF) Simple HTML Ontology Extension (SHOE) Ontology Markup Language (OML) Conceptual Knowledge Markup Language (CKML), extension of OML Operational Conceptual Modeling Language (OCML) Ontology Web Language (OWL) XML Common Logic (XCL) as specified in Appendix C of ISO/IEC IS 24707:2007 Description Logic Markup Language (DLML) Description Logic Language GRAIL Description Logic Language LOOM Relational Functional Markup Language (RFML) Under investigation: Rule Markup Language (RuleML) Multimodal Rule Markup Language (MRML) - Natural Interchange Format (NIF) Meaning Definition Language (MDL) Natural Language Processing to Web Ontology Language (NLP2OWL™) - NLP Interchange Format (NIF) Natural Image Processing to Web Ontology Language (NIP2OWL™) - NIP Interchange Format (NIF)
Mathematics Engineering Mathematics Ontology	Mathematics OpenMath Field Modelling/Markup Language (FieldML)
Mathematics: Documentation	Mathematics: Documentation Mathematical Markup Language (MathML) Mathematical Documents (OMDoc)
Medicine Medical Subject Headings (MeSH®) Unified Medical Language System® (UMLS®) Transparent Access to Multiple Bioinformatics Information Sources (TAMBIS) Ontology (TaO)	Medicine HL7 XML Clinical Data Interchange Standards Consortium (CDISC)
Physics	Physics Measurement Units Markup Language Physics Markup Language (PhysicsML) eXtensible Data Format (XDF) Common Data Format (CDF) Markup Language (CDFML)
Engineering Documentation	Engineering Documentation Publishing Requirements for Industry Standard Metadata (PRISM)
Management Supervisory Control And Data Acquisition Ontology (ScadaOnWeb)	Management
Materials	Materials Materials Property Data Markup Language (MatML) American Iron and Steel Institute (AISI) XML Workgroup Steel Markup Language (SML)
Instruments	Instruments Instrument Markup Language (IML), applies to computer controlled instruments
Buildung / Architecture	Buildung / Architecture Architecture, Engineering and Construction Markup Language (aecXML) Green Building XML (gbXML) Building Construction Extensible Markup Language (bcXML) eBuild-XML OASIS Open Building Information Exchange (oBIX)
Automotive	Automotive XML for the Automotive Industry - SAE J2008
Aviation Air Traffic Services (Aviation) Ontology Airport Ontology	Aviation
Astronautics / Space Shuttle Crew Ontology	Astronautics / Space Spacecraft Markup Language (SML)
Communication Foundation for Intelligent Physical Agents (FIPA) Quality of Service (QoS) Ontology of the Message Transport Service	Communication XML encoding rules (XER) for ASN.1 Call Processing Language (CPL) Wireless Markup Language (WML)
Software-Technology: Development	Software-Technology: Development Object Oriented Programing Meta-Language (OOPML) Object Role Modeling Markup Language (ORM-ML) UML eXchange Format (UXF)
Software-Technology: Graphics	Software-Technology: Graphics Scalable Vector Graphics (SVG) Virtual Reality Markup Language (VRML) Extensible 3D (X3D) Synchronized Multimedia Integration Language (SMIL)
Other areas	Other areas Nanotechnology Robotic Markup Language (RoboML) Hospitality Industry Technology Integration Standards (HITIS) papiNet paper and forest products Standards
Enterprise / Business / Commerce Management Enterprise Ontology Planning and Scheduling Ontologies TOronto Virtual Enterprise (TOVE) Project Ontologies Process Specification Language (PSL) Ontology in Common Logic Interchange Format (CLIF)	Enterprise / Business / Commerce Management swiftML for Business Messages Process Interchange Format (PIF)
E-Commerce OWL-based Web Service Ontology (OWL-S formerly DAML-S)	E-Commerce Business Rules Markup Language (BRML) Electronic Business XML Initiative (ebXML) eCo Interoperability Framework Specification RosettaNet XML/EDI Electronic Commerce Modeling Language (ECML) Commerce XML (cXML) Open Standard for Small to Medium Sized Businesses (SMBXML) Marketplace XML (mpXML) Universal Business Language (UBL) TranXML TransportationXML (tXML) Tracker XML (TXML) Physical Markup Language (PML) for Radio Frequency Identification (RFID) Open Catalog Protocol (OCP) eCatalog XML (eCX) Product Data Markup Language (PDML) Product Definition Exchange (PDX) Electronic Component Information Exchange (ECIX) ECIX QuickData Specifications ECIX Component Information Dictionary Standard (CIDS)
Finance	Finance Financial Services Markup Language (FSML) Open Financial Exchange (OFX) Interactive Financial Exchange (IFX) Standard Financial Information eXchange (FIX) Protocol Digital Language for Capital Markets (FinXML) Extensible Financial Reporting Markup Language (XFRML) Extensible Business Reporting Language (XBRL) Investment Research Markup Language (IRML) Financial Research Documents Markup Language (FAML) (Investment and financial) Research Information Exchange Markup Language (RIXML) Vendor Reporting Extensible Markup Language(VRXML) Financial products Markup Language (FpML®) Treasury Workstation Integration Standards Team (TWIST) Markets Markup Language Initiative Market Data Definition Language (MDDL) Market Data Markup Language (MDML) Bank Internet Payment System (BIPS) XMLPay Specification Real Estate Transaction Markup Language (RETML) Value Chain Markup Language (VCML)
Society	Society Government National Information Exchange Model (NIEM) Election Markup Language (EML) Common Vocabulary for Parliamentary Language (ParlML) Legal LegalXML Global Justice XML Data Model (Global JXDM) (Archive) (U.S. Department of Justice (DOJ) Office of Justice Programs (OJP)), "adoption of the broader successor to the GJXDM, the National Information Exchange Model (NIEM), is highly encouraged" Social Network Friend of a friend (FOAF) using the RDF and OWL Education Schools Interoperability Framework (SIF) Specification
Others / Unclassified ARPA Knowledge Sharing Effort Ontolingua (programmed in Common LISP, based on KIF and its ontological extension specified in the Frame Ontology) ontologies 3d-Tensor-Quantities Abstract-Algebra Acme-Move-Composite Agents Basic-Matrix-Algebra Bibliographic-Data Chemical-Crystals Chemical-Elements Cml Component-Assemblies Components-With-Constraints Daml-Ontology Daml-S-Process Daml-S-Service Device-Ontology Dme-Cml Enterprise-Ontology Frame-Ontology Hpkb-Upper-Level-Kernel-Latest Hpkb-Upper-Level-Latest Hpkb-Upper-Level-Relations-Latest Hpkb-Y2-Ontology Interface-Definition-Language Interface-Ontology Jat-Generic Job-Assignment-Task Kif-Extensions Kif-Lists Kif-Meta Kif-Numbers Kif-Relations Kif-Sets Lolo Mace-Domain Mechanical-Components Meld-Ontology Okbc-Ontology Ontolingua-User-Documents Parametric-Constraints Physical-Quantities Process Product-Ontology Quantity-Spaces Ranges Rdf-Schema-Ontology Rdf-Syntax-Ontology Scalar-Quantities Simple-Geometry Simple-Time Slot-Constraint-Sugar Standard-Dimensions Standard-Units Tensor-Quantities Test Testham Thermal-System Unary-Scalar-Functions User-Ontology Vt-Design Vt-Domain Vt-Example World-Fact-Book	Others Cookery Recipe Markup Language (RecipeML) Travel OpenTravel schema

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